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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906939.1_cds_XP_016457099.1_50863
CDS Infomation

[gene=LOC107780984] [db_xref=GeneID:107780984] [protein=BRCA1-associated protein-like] [protein_id=XP_016457099.1] [location=join(80989..81117,81770..81885,81973..82081,82190..82304,84195..84292,85648..85754,85911..86160,86300..86353,86519..86668,86810..86874,87679..87733,87832..87888)] [gbkey=CDS]
Sequence

ATGGATTCAGGGGATTCATCAATGTCTAAGGTGTTTCATTTTTCATCTGGAAACCCTCGC
ATCGAAGAAACCAGGGGTGTCATGCATCTCTTCTGCAACGAACAACCTTCTTTTTCGTCT
CAGTTACCTGTGGGAAGAAAGCCTCTCCTCTGCGTGCTCAGTGTTCCGAATCACATGACA
TATGCAGACTTTTGTCAGTTTTGTGGTTCATTTGTTCAACATATGTTGGAAATGCGAATT
GTCAGGAATGATGGAATGGAAGATTGTTACAGTATATTGATCAGGTTTGATGAGCAGAAA
GCTGCAGACACTTTTCACAAGCATTTTAGTGGTAGAAAATTTTCATCTCTTGAGGACGAG
ACCTGCAATGTGTTTTTTGCTGCCGATGTTCATTACACTGGTTCAATTGAACGCACCCAG
TCCATACCTGCAAGCTCTACAGAGCAACCATTCTGTCCTGTTTGTCTTGAGAGACTGGAC
CAGGATACAAGTGGAATTCTCACAACCATTTGTAATCATTCGTTTCATTGTTCATGTATT
TCTAAATGGACAGATTCTTCGTGCCCTGTATGTCGATACTGCCAGCAGCAGCCTGGAAAC
TCAACGTGTTCTATCTGTCAATCACCAGAAAATCTATGGATGTGTGTTATTTGTGGTTTT
GTTGGGTGTGGAAGATACAAAGAAGCTCATGCTATAAGGCACTGGAAAGAGACACAACAT
TGCTATGCACTTGAACTGGAAACGCGTCGTGTCTGGGACTACTCAGGGGACAACTATGTT
CACCGTTTGATTCAGTCTAAAACTGATGGCAAGTTGGTTGAGCTCAACCACCATTGTCAT
CATGATAATGATGGCTGCTGCAGCTGCGAATGTGCTACAGATCCTGGATTTAGTGAGACT
CTTGTAAACAGCAAAGTTGAAGCTATTGTGAACGAGTACAATGAGCTCTTGACTTCGCAA
TTGGAGAACCAAAAAATGTACTTCGAGTCCTTACTGCAAGGGGTTGAAGAAGAAACTGAT
AGGGAAATTAAGGAAGCTGTTGAGAAAGCACTATGTCAGACTCCAAGGTTGATGAAGTTA
AAAGTGCGTTTGGACAAATGCATTGAAGAGAAGAAATTTCTTGATGATATCAATGACAAT
CTTACCAGAAACAAGGAGATATGGGAAGCCAAGATATCAGAGATTGAAGAAAGGGAGAAG
AGGAAGTTGAAAATAAAGGATGAGAAGATACAAGAATTGGAGGAACAGCTTGCAACTGTG
ATGGCATCCATCGAAAAGGAGAATGCAATTCAAGAGATGCCTTAG

Peptide Sequence

PEP ID

XP_016457099.1
PEP Infomation

PREDICTED: BRCA1-associated protein-like [Nicotiana tabacum]
Sequence

MDSGDSSMSKVFHFSSGNPRIEETRGVMHLFCNEQPSFSSQLPVGRKPLLCVLSVPNHMT
YADFCQFCGSFVQHMLEMRIVRNDGMEDCYSILIRFDEQKAADTFHKHFSGRKFSSLEDE
TCNVFFAADVHYTGSIERTQSIPASSTEQPFCPVCLERLDQDTSGILTTICNHSFHCSCI
SKWTDSSCPVCRYCQQQPGNSTCSICQSPENLWMCVICGFVGCGRYKEAHAIRHWKETQH
CYALELETRRVWDYSGDNYVHRLIQSKTDGKLVELNHHCHHDNDGCCSCECATDPGFSET
LVNSKVEAIVNEYNELLTSQLENQKMYFESLLQGVEEETDREIKEAVEKALCQTPRLMKL
KVRLDKCIEEKKFLDDINDNLTRNKEIWEAKISEIEEREKRKLKIKDEKIQELEEQLATV
MASIEKENAIQEMP

Transcript Sequence

Gene sequence data has not been registered.